Integrated protein-protein interaction database of
Synechocystis sp. PCC 6803






Statistics

Table 1. Network analysis for protein-protein interactions of PSIMAP, iPfam, interDom, and STRING.

¡¡ node  edge  self edge  subgraph  average degree 
PSIMAP 1028  12748  1133  109  22.6 
iPfam 1541  13448  1446  178  17.99 
interDom 1760  80319  1336  14  92.59 
STRING 2658  26805  39  20.17 

¡¡

Table 2. Overlap relationship for protein-protein interactions among PSIMAP, iPfam, interDom, and STRING.

¡¡ PSIMAP iPfam interDom STRING
percent interaction percent interaction percent interaction percent interaction
PSIMAP ¡¡ ¡¡ 29.77% 3795 31.35% 3996 15.33% 1954
iPfam 28.22% 3795 ¡¡ ¡¡ 80.29% 10798 7.44% 1001
interDom 4.98% 3996 13.44% 10798 ¡¡ ¡¡ 2.10% 1687
STRING 7.29% 1954 3.73% 1001 6.29% 1687 ¡¡ ¡¡