Integrated protein-protein interaction database of
Synechocystis sp. PCC 6803
Table 1. Network analysis for protein-protein interactions of PSIMAP, iPfam, interDom, and STRING.
| ¡¡ | node | edge | self edge | subgraph | average degree |
| PSIMAP | 1028 | 12748 | 1133 | 109 | 22.6 |
| iPfam | 1541 | 13448 | 1446 | 178 | 17.99 |
| interDom | 1760 | 80319 | 1336 | 14 | 92.59 |
| STRING | 2658 | 26805 | 0 | 39 | 20.17 |
¡¡
Table 2. Overlap relationship for protein-protein interactions among PSIMAP, iPfam, interDom, and STRING.
| ¡¡ | PSIMAP | iPfam | interDom | STRING | ||||
| percent | interaction | percent | interaction | percent | interaction | percent | interaction | |
| PSIMAP | ¡¡ | ¡¡ | 29.77% | 3795 | 31.35% | 3996 | 15.33% | 1954 |
| iPfam | 28.22% | 3795 | ¡¡ | ¡¡ | 80.29% | 10798 | 7.44% | 1001 |
| interDom | 4.98% | 3996 | 13.44% | 10798 | ¡¡ | ¡¡ | 2.10% | 1687 |
| STRING | 7.29% | 1954 | 3.73% | 1001 | 6.29% | 1687 | ¡¡ | ¡¡ |